Publications - 2016

Since the BIDC's inception, we have contributed to over 120 peer-reviewed publications. If you have utilized BIDC resources (microscopes, analysis, expertise), please submit the publication to [email protected] to be included in our list. 

  1. Arora, Ripla, Adam Fries, Karina Oelerich, Kyle Marchuk, Khalida Sabeur, Linda C. Giudice, and Diana J. Laird. 2016. “Insights from Imaging the Implanting Embryo and the Uterine Environment in Three Dimensions.” Development 143 (24): 4749–54. [doi:10.1242/dev.144386].
  2. Gordon ED, Simpson LJ, Rios CL, Ringel L, Lachowicz-Scroggins ME, Peters MC, Wesolowska-Andersen A, Gonzalez JR, MacLeod HJ, Christian LS, Yuan S, Barry L, Woodruff PG, Ansel KM, Nocka K, Seibold MA, Fahy JV. “Alternative splicing ofinterleukin-33 and type 2 inflammation in asthma.” Proc Natl Acad Sci U S A. 2016  Aug 2;113(31):8765-70. [doi:10.1073/pnas.1601914113].
  3. Johnston, Michael J., Shaked Bar-Cohen, Ze ’ev Paroush, and Todd G. Nystul. 2016. “Phosphorylated Groucho Delays Differentiation in the Follicle Stem Cell Lineage by Providing a Molecular Memory of EGFR Signaling in the Niche.” Development 143 (24):4631–42. [doi: 10.1242/dev.143263].
  4. Lefrançais, Emma, Beñat Mallavia, and Mark R. Looney. 2016. “Lung Imaging in Animal Models.” In Acute Lung Injury and Repair, edited by Lynn M. Schnapp and Carol Feghali-Bostwick, 107–32. Respiratory Medicine. Springer International Publishing. [doi:10.1007/978-3-319-46527-2_8].
  5. Mujal, Adriana M., Julia K. Gilden, Audrey Gérard, Makoto Kinoshita, and Matthew F. Krummel. 2016. “A Septin Requirement Differentiates Autonomous- and Contact-Facilitated T Cell Proliferation.” Nature Immunology 17 (3): 315–22. [doi:10.1038/ni.3330].
  6. Pinkard, Henry, Kaitlin Corbin, and Matthew F. Krummel. 2016. “Spatiotemporal Rank Filtering Improves Image Quality Compared to Frame Averaging in 2-Photon Laser Scanning Microscopy.” PLOS ONE 11 (3): e0150430. [doi:10.1371/journal.pone.0150430].
  7. Pinkard, Henry, Nico Stuurman, Kaitlin Corbin, Ronald Vale, and Matthew F. Krummel. 2016. “Micro-Magellan: Open-Source, Sample-Adaptive, Acquisition Software for Optical Microscopy.” Nature Methods 13 (10): 807–9. [doi:10.1038/nmeth.3991].
  8. Sen, Debasish, Stephen M. Jones, Erin M. Oswald, Henry Pinkard, Kaitlin Corbin, and Matthew F. Krummel. 2016. “Tracking the Spatial and Functional Gradient of Monocyte-To-Macrophage Differentiation in Inflamed Lung.” PLOS ONE 11 (10): e0165064. [doi:10.1371/journal.pone.0165064].
  9. Takai, K., A. Le, V. M. Weaver & Z. Werb (2016). Targeting the cancer-associated fibroblasts as a treatment in triple-negative breast cancer. Oncotarget. 7:82889-82901 (Epub ahead of print Oct. 14). PMID: 27756881; PMCID: [PMC5341254].
  10. Ulmschneider, Bryne, Bree K. Grillo-Hill, Marimar Benitez, Dinara R. Azimova, Diane L. Barber, and Todd G. Nystul. 2016. “Increased Intracellular pH Is Necessary for Adult Epithelial and Embryonic Stem Cell Differentiation.” J Cell Biol 215 (3):345–55. [doi:10.1083/jcb.201606042].